Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.16□□□□□ -0.14
ALX3O95076 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.16□□□□□ -0.14
ALX3O95076 PRSS29P-201ENST00000440800 595 ntBASIC14.16□□□□□ -0.14
ALX3O95076 LINC02447-202ENST00000501888 2146 ntBASIC14.16□□□□□ -0.14
ALX3O95076 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.16□□□□□ -0.14
ALX3O95076 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
ALX3O95076 AL662844.1-201ENST00000546340 181 ntBASIC14.16□□□□□ -0.14
ALX3O95076 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.16□□□□□ -0.14
ALX3O95076 OR7E47P-204ENST00000575924 449 ntBASIC14.16□□□□□ -0.14
ALX3O95076 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.16□□□□□ -0.14
ALX3O95076 AC005593.1-201ENST00000624894 515 ntBASIC14.16□□□□□ -0.14
ALX3O95076 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.16□□□□□ -0.14
ALX3O95076 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.16□□□□□ -0.14
ALX3O95076 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.16□□□□□ -0.14
ALX3O95076 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.16□□□□□ -0.14
ALX3O95076 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.16□□□□□ -0.14
ALX3O95076 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ALX3O95076 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ALX3O95076 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ALX3O95076 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.15□□□□□ -0.14
ALX3O95076 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.15□□□□□ -0.14
ALX3O95076 AC005622.1-201ENST00000636801 1703 ntBASIC14.15□□□□□ -0.14
ALX3O95076 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.15□□□□□ -0.14
ALX3O95076 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.15□□□□□ -0.14
ALX3O95076 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
ALX3O95076 CICP17-201ENST00000418553 2377 ntBASIC14.15□□□□□ -0.14
ALX3O95076 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.15□□□□□ -0.14
ALX3O95076 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ALX3O95076 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.15□□□□□ -0.14
ALX3O95076 AC018712.1-201ENST00000455767 687 ntBASIC14.15□□□□□ -0.14
ALX3O95076 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.15□□□□□ -0.14
ALX3O95076 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.15□□□□□ -0.14
ALX3O95076 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.15□□□□□ -0.14
ALX3O95076 AL645728.2-201ENST00000641974 660 ntBASIC14.15□□□□□ -0.14
ALX3O95076 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.15□□□□□ -0.14
ALX3O95076 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.15□□□□□ -0.14
ALX3O95076 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
ALX3O95076 AL109954.1-202ENST00000564051 2148 ntBASIC14.15□□□□□ -0.14
ALX3O95076 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.15□□□□□ -0.14
ALX3O95076 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.15□□□□□ -0.14
ALX3O95076 AL390755.1-201ENST00000623716 2027 ntBASIC14.15□□□□□ -0.14
ALX3O95076 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.15□□□□□ -0.14
ALX3O95076 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.15□□□□□ -0.14
ALX3O95076 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ALX3O95076 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
ALX3O95076 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
ALX3O95076 PTENP1-202ENST00000532280 3996 ntBASIC14.15□□□□□ -0.15
ALX3O95076 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
ALX3O95076 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.14□□□□□ -0.15
ALX3O95076 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
ALX3O95076 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ALX3O95076 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.14□□□□□ -0.15
ALX3O95076 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ALX3O95076 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.14□□□□□ -0.15
ALX3O95076 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ALX3O95076 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ALX3O95076 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ALX3O95076 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ALX3O95076 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ALX3O95076 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ALX3O95076 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.14□□□□□ -0.15
ALX3O95076 RNU1-129P-201ENST00000384064 167 ntBASIC14.14□□□□□ -0.15
ALX3O95076 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.14□□□□□ -0.15
ALX3O95076 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.14□□□□□ -0.15
ALX3O95076 EMBP1-201ENST00000458200 901 ntBASIC14.14□□□□□ -0.15
ALX3O95076 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.14□□□□□ -0.15
ALX3O95076 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.14□□□□□ -0.15
ALX3O95076 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.14□□□□□ -0.15
ALX3O95076 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms