Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTSS1O43312 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTSS1O43312 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTSS1O43312 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MTSS1O43312 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MTSS1O43312 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.23■□□□□ 0.19
MTSS1O43312 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.23■□□□□ 0.19
MTSS1O43312 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.23■□□□□ 0.19
MTSS1O43312 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
MTSS1O43312 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MTSS1O43312 NORAD-201ENST00000565493 5339 ntBASIC16.23■□□□□ 0.19
MTSS1O43312 FLJ16779-201ENST00000612722 7638 ntBASIC16.23■□□□□ 0.19
MTSS1O43312 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.23■□□□□ 0.19
MTSS1O43312 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.23■□□□□ 0.19
MTSS1O43312 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.23■□□□□ 0.19
MTSS1O43312 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.23■□□□□ 0.19
MTSS1O43312 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.23■□□□□ 0.19
MTSS1O43312 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 MIR4453-201ENST00000584019 89 ntBASIC16.23■□□□□ 0.19
MTSS1O43312 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.23■□□□□ 0.19
MTSS1O43312 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.23■□□□□ 0.19
MTSS1O43312 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
MTSS1O43312 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MTSS1O43312 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MTSS1O43312 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
MTSS1O43312 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.23■□□□□ 0.19
MTSS1O43312 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.23■□□□□ 0.19
MTSS1O43312 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MTSS1O43312 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.23■□□□□ 0.19
MTSS1O43312 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MTSS1O43312 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.22■□□□□ 0.19
MTSS1O43312 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.22■□□□□ 0.19
MTSS1O43312 AC092384.3-202ENST00000564646 2873 ntBASIC16.22■□□□□ 0.19
MTSS1O43312 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MTSS1O43312 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MTSS1O43312 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MTSS1O43312 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.22■□□□□ 0.19
MTSS1O43312 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 AZGP1P1-201ENST00000411909 902 ntBASIC16.22■□□□□ 0.19
MTSS1O43312 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.22■□□□□ 0.19
MTSS1O43312 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 MTND6P24-201ENST00000440466 518 ntBASIC16.22■□□□□ 0.19
MTSS1O43312 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.22■□□□□ 0.19
MTSS1O43312 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.22■□□□□ 0.19
MTSS1O43312 HLA-J-203ENST00000494367 1087 ntBASIC16.22■□□□□ 0.19
MTSS1O43312 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.22■□□□□ 0.19
MTSS1O43312 AC069262.1-201ENST00000539058 672 ntBASIC16.22■□□□□ 0.19
MTSS1O43312 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.22■□□□□ 0.19
MTSS1O43312 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MTSS1O43312 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.22■□□□□ 0.19
MTSS1O43312 AC097359.3-201ENST00000603982 1210 ntBASIC16.22■□□□□ 0.19
MTSS1O43312 SSR4P1-203ENST00000599569 2260 ntBASIC16.22■□□□□ 0.19
MTSS1O43312 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 AC104640.1-201ENST00000562617 2109 ntBASIC16.22■□□□□ 0.19
MTSS1O43312 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.22■□□□□ 0.19
MTSS1O43312 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 AC126177.1-201ENST00000547829 2218 ntBASIC16.22■□□□□ 0.19
MTSS1O43312 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
MTSS1O43312 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MTSS1O43312 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MTSS1O43312 AC092850.2-201ENST00000623821 2697 ntBASIC16.22■□□□□ 0.19
MTSS1O43312 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.21■□□□□ 0.19
MTSS1O43312 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.21■□□□□ 0.19
MTSS1O43312 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTSS1O43312 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MTSS1O43312 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.21■□□□□ 0.19
MTSS1O43312 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.21■□□□□ 0.19
MTSS1O43312 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms