Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 C18orf15-201ENST00000623680 2534 ntBASIC10.93□□□□□ -0.66
NDUFA1O15239 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 GSN-215ENST00000545652 2428 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 SLC9A3P2-201ENST00000447821 2021 ntBASIC10.92□□□□□ -0.66
NDUFA1O15239 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
NDUFA1O15239 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.92□□□□□ -0.66
NDUFA1O15239 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 SLC22A20-204ENST00000530038 1673 ntBASIC10.92□□□□□ -0.66
NDUFA1O15239 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC10.92□□□□□ -0.66
NDUFA1O15239 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.92□□□□□ -0.66
NDUFA1O15239 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 RPS2P28-201ENST00000314255 741 ntBASIC10.92□□□□□ -0.66
NDUFA1O15239 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 DPM2-202ENST00000373110 738 ntTSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
NDUFA1O15239 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC10.92□□□□□ -0.66
NDUFA1O15239 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC10.92□□□□□ -0.66
NDUFA1O15239 AC107918.2-201ENST00000530817 355 ntBASIC10.92□□□□□ -0.66
NDUFA1O15239 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC10.92□□□□□ -0.66
NDUFA1O15239 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC10.92□□□□□ -0.66
NDUFA1O15239 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 AC005593.1-201ENST00000624894 515 ntBASIC10.92□□□□□ -0.66
NDUFA1O15239 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC10.92□□□□□ -0.66
NDUFA1O15239 AGAP7P-201ENST00000582299 2062 ntBASIC10.92□□□□□ -0.66
NDUFA1O15239 AGAP14-201ENST00000624701 2060 ntBASIC10.92□□□□□ -0.66
NDUFA1O15239 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 LINC00552-201ENST00000625151 2579 ntBASIC10.92□□□□□ -0.66
NDUFA1O15239 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
NDUFA1O15239 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
NDUFA1O15239 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NDUFA1O15239 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.92□□□□□ -0.66
NDUFA1O15239 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC10.92□□□□□ -0.66
NDUFA1O15239 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
NDUFA1O15239 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.91□□□□□ -0.66
NDUFA1O15239 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
NDUFA1O15239 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NDUFA1O15239 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms