Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CMC2-224ENST00000630396 481 ntTSL 5 BASIC24.89■■□□□ 1.57
CHD1O14646 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD1O14646 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC24.89■■□□□ 1.57
CHD1O14646 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD1O14646 FAM90A2P-201ENST00000511144 1395 ntBASIC24.89■■□□□ 1.57
CHD1O14646 FAM90A25P-201ENST00000528404 1395 ntBASIC24.89■■□□□ 1.57
CHD1O14646 E2F3P2-201ENST00000447755 1422 ntBASIC24.89■■□□□ 1.57
CHD1O14646 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC24.88■■□□□ 1.57
CHD1O14646 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 MBLAC2-202ENST00000514906 1936 ntBASIC24.88■■□□□ 1.57
CHD1O14646 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC24.88■■□□□ 1.57
CHD1O14646 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC24.88■■□□□ 1.57
CHD1O14646 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CHD1O14646 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC24.88■■□□□ 1.57
CHD1O14646 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC24.88■■□□□ 1.57
CHD1O14646 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CHD1O14646 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC24.88■■□□□ 1.57
CHD1O14646 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CHD1O14646 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC24.88■■□□□ 1.57
CHD1O14646 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 MESTP3-201ENST00000503460 968 ntBASIC24.88■■□□□ 1.57
CHD1O14646 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC24.88■■□□□ 1.57
CHD1O14646 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 FLII-221ENST00000578558 2377 ntTSL 5 BASIC24.88■■□□□ 1.57
CHD1O14646 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1O14646 MIR4522-201ENST00000584932 87 ntBASIC24.88■■□□□ 1.57
CHD1O14646 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC24.88■■□□□ 1.57
CHD1O14646 AC107464.3-201ENST00000609172 737 ntBASIC24.88■■□□□ 1.57
CHD1O14646 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1O14646 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1O14646 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1O14646 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC24.87■■□□□ 1.57
CHD1O14646 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC24.87■■□□□ 1.57
CHD1O14646 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
CHD1O14646 ACTBP7-201ENST00000418351 1124 ntBASIC24.87■■□□□ 1.57
CHD1O14646 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CHD1O14646 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1O14646 AC103810.10-201ENST00000606504 343 ntBASIC24.87■■□□□ 1.57
CHD1O14646 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1O14646 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC24.87■■□□□ 1.57
CHD1O14646 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1O14646 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC24.87■■□□□ 1.57
CHD1O14646 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1O14646 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC24.87■■□□□ 1.57
CHD1O14646 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC24.87■■□□□ 1.57
CHD1O14646 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC24.87■■□□□ 1.57
CHD1O14646 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1O14646 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1O14646 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC24.86■■□□□ 1.57
CHD1O14646 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD1O14646 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD1O14646 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC24.86■■□□□ 1.57
CHD1O14646 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC24.86■■□□□ 1.57
CHD1O14646 HKR1-225ENST00000592168 566 ntTSL 4 BASIC24.86■■□□□ 1.57
CHD1O14646 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CHD1O14646 AC002472.3-201ENST00000640124 621 ntBASIC24.86■■□□□ 1.57
CHD1O14646 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
CHD1O14646 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC24.86■■□□□ 1.57
CHD1O14646 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD1O14646 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
CHD1O14646 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
CHD1O14646 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD1O14646 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
CHD1O14646 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1O14646 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1O14646 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1O14646 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC24.86■■□□□ 1.57
CHD1O14646 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC24.86■■□□□ 1.57
CHD1O14646 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
CHD1O14646 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
CHD1O14646 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1O14646 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC24.86■■□□□ 1.57
CHD1O14646 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1O14646 PFN2-206ENST00000461930 606 ntTSL 4 BASIC24.86■■□□□ 1.57
CHD1O14646 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1O14646 AC100827.2-201ENST00000563214 1194 ntBASIC24.86■■□□□ 1.57
CHD1O14646 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC24.86■■□□□ 1.57
CHD1O14646 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1O14646 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1O14646 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
CHD1O14646 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1O14646 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1O14646 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1O14646 AC130709.1-201ENST00000484779 1212 ntBASIC24.85■■□□□ 1.57
CHD1O14646 POLD4-208ENST00000532830 904 ntTSL 3 BASIC24.85■■□□□ 1.57
CHD1O14646 AC012158.2-201ENST00000536546 354 ntBASIC24.85■■□□□ 1.57
CHD1O14646 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC24.85■■□□□ 1.57
CHD1O14646 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC24.85■■□□□ 1.57
CHD1O14646 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
CHD1O14646 AC005962.1-201ENST00000584100 773 ntBASIC24.85■■□□□ 1.57
CHD1O14646 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC24.85■■□□□ 1.57
CHD1O14646 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms