Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 TUBB3P1-201ENST00000405796 1332 ntBASIC16.52■□□□□ 0.24
SRRM3A6NNA2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 RN7SL692P-201ENST00000464677 288 ntBASIC16.52■□□□□ 0.24
SRRM3A6NNA2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 SLC25A39P2-201ENST00000537614 270 ntBASIC16.52■□□□□ 0.24
SRRM3A6NNA2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 AD001527.2-201ENST00000622994 785 ntBASIC16.52■□□□□ 0.24
SRRM3A6NNA2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM3A6NNA2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.52■□□□□ 0.23
SRRM3A6NNA2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SRRM3A6NNA2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 KLF2P3-201ENST00000451977 1087 ntBASIC16.51■□□□□ 0.23
SRRM3A6NNA2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 AC068137.2-201ENST00000605408 478 ntBASIC16.51■□□□□ 0.23
SRRM3A6NNA2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM3A6NNA2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 AC005912.2-201ENST00000619492 2400 ntBASIC16.5■□□□□ 0.23
SRRM3A6NNA2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 LINC00552-201ENST00000625151 2579 ntBASIC16.5■□□□□ 0.23
SRRM3A6NNA2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.5■□□□□ 0.23
SRRM3A6NNA2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms