Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 MBLAC2-202ENST00000514906 1936 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 RN7SKP109-201ENST00000410592 316 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC108734.2-201ENST00000420887 1069 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 TSPY25P-201ENST00000429463 745 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 SLED1-202ENST00000512051 380 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 SOD1-202ENST00000389995 865 ntTSL 3 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 PGAM1P11-201ENST00000416729 680 ntBASIC6.28□□□□□ -1.4
MACF1Q9UPN3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 PPIA-208ENST00000489459 907 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 HNRNPA1P7-201ENST00000521273 963 ntBASIC6.28□□□□□ -1.4
MACF1Q9UPN3 AC010335.3-201ENST00000623767 531 ntBASIC6.28□□□□□ -1.4
MACF1Q9UPN3 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 E2F3P2-201ENST00000447755 1422 ntBASIC6.28□□□□□ -1.4
MACF1Q9UPN3 AC009053.2-201ENST00000563701 2365 ntBASIC6.28□□□□□ -1.4
MACF1Q9UPN3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 AL136295.7-201ENST00000619226 1200 ntBASIC6.28□□□□□ -1.4
MACF1Q9UPN3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 SHC1P1-201ENST00000425230 1745 ntBASIC6.28□□□□□ -1.4
MACF1Q9UPN3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 B9D1-206ENST00000461069 923 ntTSL 2 BASIC6.28□□□□□ -1.4
MACF1Q9UPN3 RN7SL578P-201ENST00000477781 283 ntBASIC6.28□□□□□ -1.4
MACF1Q9UPN3 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms