Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCDNQ9UBB6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 AL136982.4-201ENST00000437689 1740 ntBASIC15.71■□□□□ 0.11
NCDNQ9UBB6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 KRT8P37-201ENST00000451609 1420 ntBASIC15.71■□□□□ 0.11
NCDNQ9UBB6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 AC104457.1-201ENST00000401024 814 ntBASIC15.71■□□□□ 0.11
NCDNQ9UBB6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 VDAC1P7-201ENST00000462417 847 ntBASIC15.71■□□□□ 0.11
NCDNQ9UBB6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 AC138627.1-207ENST00000641560 1006 ntBASIC15.71■□□□□ 0.11
NCDNQ9UBB6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NCDNQ9UBB6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NCDNQ9UBB6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NCDNQ9UBB6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NCDNQ9UBB6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.7■□□□□ 0.1
NCDNQ9UBB6 CNN2P8-201ENST00000421872 913 ntBASIC15.7■□□□□ 0.1
NCDNQ9UBB6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 RPL13P2-201ENST00000440687 659 ntBASIC15.7■□□□□ 0.1
NCDNQ9UBB6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 HNRNPUP1-201ENST00000554987 333 ntBASIC15.7■□□□□ 0.1
NCDNQ9UBB6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 AC116353.5-201ENST00000638148 1699 ntBASIC15.7■□□□□ 0.1
NCDNQ9UBB6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.7■□□□□ 0.1
NCDNQ9UBB6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 259 ms