Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 OR7E47P-204ENST00000575924 449 ntBASIC19.59■□□□□ 0.73
UPF2Q9HAU5 AC008735.5-201ENST00000623544 497 ntBASIC19.59■□□□□ 0.73
UPF2Q9HAU5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 AC007292.2-201ENST00000593524 1812 ntBASIC19.59■□□□□ 0.73
UPF2Q9HAU5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.59■□□□□ 0.73
UPF2Q9HAU5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
UPF2Q9HAU5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 AC004790.2-201ENST00000623588 572 ntBASIC19.58■□□□□ 0.72
UPF2Q9HAU5 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.58■□□□□ 0.72
UPF2Q9HAU5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 AC105339.3-201ENST00000560043 636 ntBASIC19.57■□□□□ 0.72
UPF2Q9HAU5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 WASH6P-202ENST00000359512 1437 ntBASIC19.57■□□□□ 0.72
UPF2Q9HAU5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 AC091951.1-201ENST00000512854 2465 ntBASIC19.57■□□□□ 0.72
UPF2Q9HAU5 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UPF2Q9HAU5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPF2Q9HAU5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms