Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 AL353705.2-201ENST00000428243 662 ntBASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 BASP1P1-201ENST00000430708 665 ntBASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 RNA5SP421-201ENST00000516864 134 ntBASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 AC092364.2-202ENST00000597012 1073 ntBASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 AL390754.1-201ENST00000619088 582 ntBASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 FOXO1B-201ENST00000504678 1527 ntBASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 AC092364.2-201ENST00000596710 2692 ntBASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 AC055876.3-201ENST00000431496 288 ntBASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 AC138649.4-201ENST00000612222 287 ntBASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.42□□□□□ -0.26
PCGF1Q9BSM1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms