Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.09■□□□□ 0.33
SNX27Q96L92 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SNX27Q96L92 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
SNX27Q96L92 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
SNX27Q96L92 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.09■□□□□ 0.33
SNX27Q96L92 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.09■□□□□ 0.33
SNX27Q96L92 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SNX27Q96L92 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SNX27Q96L92 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SNX27Q96L92 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SNX27Q96L92 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX27Q96L92 CICP6-201ENST00000457191 2729 ntBASIC17.08■□□□□ 0.33
SNX27Q96L92 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX27Q96L92 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.08■□□□□ 0.33
SNX27Q96L92 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.08■□□□□ 0.33
SNX27Q96L92 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX27Q96L92 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.08■□□□□ 0.32
SNX27Q96L92 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.08■□□□□ 0.32
SNX27Q96L92 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.08■□□□□ 0.32
SNX27Q96L92 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 CLK3P2-201ENST00000427566 1453 ntBASIC17.08■□□□□ 0.32
SNX27Q96L92 AC138969.3-201ENST00000546612 1459 ntBASIC17.08■□□□□ 0.32
SNX27Q96L92 AC138932.2-201ENST00000548268 1459 ntBASIC17.08■□□□□ 0.32
SNX27Q96L92 AC126755.4-201ENST00000549796 1459 ntBASIC17.08■□□□□ 0.32
SNX27Q96L92 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.08■□□□□ 0.32
SNX27Q96L92 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.08■□□□□ 0.32
SNX27Q96L92 AC036164.1-201ENST00000570544 333 ntBASIC17.08■□□□□ 0.32
SNX27Q96L92 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.08■□□□□ 0.32
SNX27Q96L92 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SNX27Q96L92 MIR8072-201ENST00000614241 80 ntBASIC17.08■□□□□ 0.32
SNX27Q96L92 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.08■□□□□ 0.32
SNX27Q96L92 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SNX27Q96L92 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNX27Q96L92 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.08■□□□□ 0.32
SNX27Q96L92 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.08■□□□□ 0.32
SNX27Q96L92 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SNX27Q96L92 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.07■□□□□ 0.32
SNX27Q96L92 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.07■□□□□ 0.32
SNX27Q96L92 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SNX27Q96L92 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.07■□□□□ 0.32
SNX27Q96L92 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 AC098614.1-201ENST00000368528 745 ntBASIC17.07■□□□□ 0.32
SNX27Q96L92 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
SNX27Q96L92 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 AC022210.1-201ENST00000449856 793 ntBASIC17.07■□□□□ 0.32
SNX27Q96L92 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.07■□□□□ 0.32
SNX27Q96L92 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.07■□□□□ 0.32
SNX27Q96L92 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.07■□□□□ 0.32
SNX27Q96L92 AC103810.3-201ENST00000583567 96 ntBASIC17.07■□□□□ 0.32
SNX27Q96L92 CTBP2P3-201ENST00000585629 1255 ntBASIC17.07■□□□□ 0.32
SNX27Q96L92 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.07■□□□□ 0.32
SNX27Q96L92 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SNX27Q96L92 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX27Q96L92 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SNX27Q96L92 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SNX27Q96L92 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX27Q96L92 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms