Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 MIR6069-201ENST00000620069 79 ntBASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 LINC00628-201ENST00000628516 1289 ntBASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 AC068418.2-201ENST00000577309 3703 ntBASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDLIM5Q96HC4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 CETN4P-206ENST00000642099 2168 ntBASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 KRT18P13-201ENST00000400056 1290 ntBASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 TARDBPP1-201ENST00000442013 1203 ntBASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 DNAJB3-202ENST00000449667 1266 ntBASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 AL589739.1-201ENST00000607720 493 ntBASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
PDLIM5Q96HC4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 AL080243.2-201ENST00000418783 582 ntBASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.48■□□□□ 0.07
PDLIM5Q96HC4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms