Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.92■□□□□ 0.62
DDX11Q96FC9 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX11Q96FC9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
DDX11Q96FC9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.91■□□□□ 0.62
DDX11Q96FC9 HAUS4P1-201ENST00000406739 1145 ntBASIC18.91■□□□□ 0.62
DDX11Q96FC9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.91■□□□□ 0.62
DDX11Q96FC9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 SPTSSB-204ENST00000617024 1292 ntBASIC18.91■□□□□ 0.62
DDX11Q96FC9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX11Q96FC9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX11Q96FC9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 FOXO1B-201ENST00000504678 1527 ntBASIC18.9■□□□□ 0.62
DDX11Q96FC9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 AP002414.2-201ENST00000591780 3365 ntBASIC18.9■□□□□ 0.62
DDX11Q96FC9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 AL353705.2-201ENST00000428243 662 ntBASIC18.9■□□□□ 0.62
DDX11Q96FC9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX11Q96FC9 AL138828.2-201ENST00000615812 383 ntBASIC18.9■□□□□ 0.62
DDX11Q96FC9 SPDYE12P-201ENST00000618416 771 ntBASIC18.9■□□□□ 0.62
DDX11Q96FC9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX11Q96FC9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms