Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 CLK3P2-201ENST00000427566 1453 ntBASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 AC022188.1-201ENST00000620960 1664 ntBASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ARHGEF39Q8N4T4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 AC098850.1-201ENST00000419919 790 ntBASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 MIR8072-201ENST00000614241 80 ntBASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 AC025048.6-201ENST00000634326 1161 ntBASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.92□□□□□ -0.02
ARHGEF39Q8N4T4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 AP005018.1-201ENST00000525475 301 ntBASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 AC140912.1-201ENST00000577171 1054 ntBASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.91□□□□□ -0.02
ARHGEF39Q8N4T4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms