Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 KRT8P37-201ENST00000451609 1420 ntBASIC15.03■□□□□ -0
CCDC116Q8IYX3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 MIR6080-201ENST00000617359 66 ntBASIC15.03■□□□□ -0
CCDC116Q8IYX3 AP001059.3-201ENST00000619053 235 ntBASIC15.03■□□□□ -0
CCDC116Q8IYX3 AP003400.6-201ENST00000624698 740 ntBASIC15.03■□□□□ -0
CCDC116Q8IYX3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 AC079781.4-201ENST00000641908 219 ntBASIC15.03■□□□□ -0
CCDC116Q8IYX3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.03■□□□□ -0
CCDC116Q8IYX3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC116Q8IYX3 AC067930.6-201ENST00000623257 4947 ntBASIC15.03■□□□□ -0
CCDC116Q8IYX3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.03■□□□□ -0
CCDC116Q8IYX3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 AC012497.1-201ENST00000429392 575 ntBASIC15.02■□□□□ -0
CCDC116Q8IYX3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 BANF1P1-201ENST00000553684 263 ntBASIC15.02■□□□□ -0
CCDC116Q8IYX3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.02■□□□□ -0
CCDC116Q8IYX3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 LINC00628-201ENST00000628516 1289 ntBASIC15.02■□□□□ -0
CCDC116Q8IYX3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC116Q8IYX3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CCDC116Q8IYX3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 AC092127.1-201ENST00000567093 3455 ntBASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC116Q8IYX3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms