Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 AC097637.2-201ENST00000624096 1997 ntBASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 MRPL20P1-201ENST00000400819 433 ntBASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 AL645939.2-201ENST00000427340 991 ntBASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 AC004877.2-201ENST00000623941 599 ntBASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 ELL2P1-201ENST00000413990 1906 ntBASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXR1Q6PIV2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms