Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 TOMM22P5-201ENST00000416399 439 ntBASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 AC092337.1-201ENST00000568699 1129 ntBASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 AC027796.2-201ENST00000575326 344 ntBASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 AF228730.6-201ENST00000641497 218 ntBASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 AC084121.3-201ENST00000641716 218 ntBASIC19.24■□□□□ 0.67
TTC41PQ6P2S7 AC136621.1-201ENST00000624017 2304 ntBASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 AC087481.3-201ENST00000602886 1894 ntBASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 MRPS18AP1-201ENST00000414458 589 ntBASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 AC093214.1-201ENST00000511688 1107 ntBASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 AC004461.2-201ENST00000629517 803 ntBASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC41PQ6P2S7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 AC008738.7-201ENST00000609744 511 ntBASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 AC004840.1-201ENST00000636359 365 ntBASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC41PQ6P2S7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC41PQ6P2S7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC41PQ6P2S7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC41PQ6P2S7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC41PQ6P2S7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC41PQ6P2S7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.21■□□□□ 0.67
TTC41PQ6P2S7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC41PQ6P2S7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.21■□□□□ 0.67
TTC41PQ6P2S7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC41PQ6P2S7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC41PQ6P2S7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms