Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 AC096733.2-201ENST00000609937 1394 ntBASIC8.08□□□□□ -1.12
LINC01554Q52M75 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01554Q52M75 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01554Q52M75 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01554Q52M75 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01554Q52M75 AC026797.1-201ENST00000624837 2869 ntBASIC8.08□□□□□ -1.12
LINC01554Q52M75 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
LINC01554Q52M75 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC8.08□□□□□ -1.12
LINC01554Q52M75 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 SRI-203ENST00000419179 1307 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 HLA-DQB2-231ENST00000435145 2026 ntBASIC8.07□□□□□ -1.12
LINC01554Q52M75 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 KIRREL3-AS3-201ENST00000404882 831 ntBASIC8.07□□□□□ -1.12
LINC01554Q52M75 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 GRAMD4P1-201ENST00000435181 1110 ntBASIC8.07□□□□□ -1.12
LINC01554Q52M75 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 NUDT16P1-203ENST00000513809 620 ntBASIC8.07□□□□□ -1.12
LINC01554Q52M75 AP003041.3-201ENST00000527151 707 ntBASIC8.07□□□□□ -1.12
LINC01554Q52M75 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 MIR4651-201ENST00000582622 73 ntBASIC8.07□□□□□ -1.12
LINC01554Q52M75 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01554Q52M75 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01554Q52M75 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 COCH-203ENST00000460581 2688 ntTSL 2 BASIC8.06□□□□□ -1.12
LINC01554Q52M75 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
LINC01554Q52M75 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
LINC01554Q52M75 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC8.06□□□□□ -1.12
LINC01554Q52M75 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
LINC01554Q52M75 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC8.06□□□□□ -1.12
LINC01554Q52M75 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC8.06□□□□□ -1.12
LINC01554Q52M75 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC8.06□□□□□ -1.12
LINC01554Q52M75 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01554Q52M75 AC232323.1-201ENST00000540724 2099 ntBASIC8.06□□□□□ -1.12
LINC01554Q52M75 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
LINC01554Q52M75 REXO1L5P-201ENST00000622260 2098 ntBASIC8.06□□□□□ -1.12
LINC01554Q52M75 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms