Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 AC232323.1-201ENST00000540724 2099 ntBASIC15.47■□□□□ 0.07
CLCN2P51788 REXO1L5P-201ENST00000622260 2098 ntBASIC15.47■□□□□ 0.07
CLCN2P51788 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 AC004461.1-201ENST00000412461 403 ntBASIC15.47■□□□□ 0.07
CLCN2P51788 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLCN2P51788 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.47■□□□□ 0.07
CLCN2P51788 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.47■□□□□ 0.07
CLCN2P51788 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 AC022145.2-201ENST00000598203 171 ntBASIC15.47■□□□□ 0.07
CLCN2P51788 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.47■□□□□ 0.07
CLCN2P51788 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN2P51788 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN2P51788 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN2P51788 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CLCN2P51788 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCN2P51788 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CLCN2P51788 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCN2P51788 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CLCN2P51788 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CLCN2P51788 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCN2P51788 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCN2P51788 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CLCN2P51788 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCN2P51788 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCN2P51788 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.46■□□□□ 0.07
CLCN2P51788 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.46■□□□□ 0.07
CLCN2P51788 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.46■□□□□ 0.07
CLCN2P51788 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CLCN2P51788 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCN2P51788 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CLCN2P51788 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.46■□□□□ 0.07
CLCN2P51788 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCN2P51788 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCN2P51788 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 CICP23-201ENST00000605013 2741 ntBASIC15.46■□□□□ 0.07
CLCN2P51788 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CLCN2P51788 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN2P51788 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLCN2P51788 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CLCN2P51788 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLCN2P51788 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms