Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 AC105020.1-201ENST00000435356 2205 ntBASIC17.75■□□□□ 0.43
TM4SF4P48230 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.75■□□□□ 0.43
TM4SF4P48230 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF4P48230 KRT8P14-201ENST00000414254 1442 ntBASIC17.75■□□□□ 0.43
TM4SF4P48230 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TM4SF4P48230 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF4P48230 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.75■□□□□ 0.43
TM4SF4P48230 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.75■□□□□ 0.43
TM4SF4P48230 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.75■□□□□ 0.43
TM4SF4P48230 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.75■□□□□ 0.43
TM4SF4P48230 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.75■□□□□ 0.43
TM4SF4P48230 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TM4SF4P48230 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
TM4SF4P48230 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.75■□□□□ 0.43
TM4SF4P48230 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM4SF4P48230 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TM4SF4P48230 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TM4SF4P48230 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TM4SF4P48230 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TM4SF4P48230 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF4P48230 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TM4SF4P48230 AC234644.1-201ENST00000406065 370 ntBASIC17.74■□□□□ 0.43
TM4SF4P48230 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.74■□□□□ 0.43
TM4SF4P48230 EIF3FP3-201ENST00000434851 1086 ntBASIC17.74■□□□□ 0.43
TM4SF4P48230 PUDPP3-201ENST00000445368 636 ntBASIC17.74■□□□□ 0.43
TM4SF4P48230 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF4P48230 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TM4SF4P48230 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TM4SF4P48230 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.74■□□□□ 0.43
TM4SF4P48230 AC242376.1-201ENST00000559033 726 ntBASIC17.74■□□□□ 0.43
TM4SF4P48230 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF4P48230 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TM4SF4P48230 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.74■□□□□ 0.43
TM4SF4P48230 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.74■□□□□ 0.43
TM4SF4P48230 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.74■□□□□ 0.43
TM4SF4P48230 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF4P48230 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF4P48230 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TM4SF4P48230 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TM4SF4P48230 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF4P48230 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF4P48230 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM4SF4P48230 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TM4SF4P48230 AC005915.1-201ENST00000624912 2018 ntBASIC17.74■□□□□ 0.43
TM4SF4P48230 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.74■□□□□ 0.43
TM4SF4P48230 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TM4SF4P48230 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TM4SF4P48230 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.73■□□□□ 0.43
TM4SF4P48230 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.73■□□□□ 0.43
TM4SF4P48230 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 RN7SL8P-201ENST00000461771 266 ntBASIC17.73■□□□□ 0.43
TM4SF4P48230 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TM4SF4P48230 RTN3P1-201ENST00000536295 711 ntBASIC17.73■□□□□ 0.43
TM4SF4P48230 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.73■□□□□ 0.43
TM4SF4P48230 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM4SF4P48230 AC092171.5-201ENST00000608012 942 ntBASIC17.73■□□□□ 0.43
TM4SF4P48230 MIR6756-201ENST00000616240 63 ntBASIC17.73■□□□□ 0.43
TM4SF4P48230 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
TM4SF4P48230 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms