Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
TOP1P11387 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.69■□□□□ 0.58
TOP1P11387 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TOP1P11387 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.69■□□□□ 0.58
TOP1P11387 TSPY26P-202ENST00000565928 3884 ntBASIC18.69■□□□□ 0.58
TOP1P11387 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP1P11387 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
TOP1P11387 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TOP1P11387 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.68■□□□□ 0.58
TOP1P11387 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TOP1P11387 AL035633.1-201ENST00000406139 838 ntBASIC18.68■□□□□ 0.58
TOP1P11387 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.68■□□□□ 0.58
TOP1P11387 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.68■□□□□ 0.58
TOP1P11387 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.68■□□□□ 0.58
TOP1P11387 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.68■□□□□ 0.58
TOP1P11387 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.68■□□□□ 0.58
TOP1P11387 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.68■□□□□ 0.58
TOP1P11387 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.68■□□□□ 0.58
TOP1P11387 AC104794.3-201ENST00000566840 1248 ntBASIC18.68■□□□□ 0.58
TOP1P11387 AC074044.1-201ENST00000609673 707 ntBASIC18.68■□□□□ 0.58
TOP1P11387 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.68■□□□□ 0.58
TOP1P11387 AC004461.2-201ENST00000629517 803 ntBASIC18.68■□□□□ 0.58
TOP1P11387 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
TOP1P11387 AL365203.3-201ENST00000609742 2057 ntBASIC18.68■□□□□ 0.58
TOP1P11387 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TOP1P11387 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TOP1P11387 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TOP1P11387 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TOP1P11387 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.67■□□□□ 0.58
TOP1P11387 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TOP1P11387 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TOP1P11387 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP1P11387 SPDYE18-201ENST00000510091 1050 ntBASIC18.67■□□□□ 0.58
TOP1P11387 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.67■□□□□ 0.58
TOP1P11387 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.67■□□□□ 0.58
TOP1P11387 AC004233.3-201ENST00000607794 1269 ntBASIC18.67■□□□□ 0.58
TOP1P11387 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.67■□□□□ 0.58
TOP1P11387 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TOP1P11387 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.67■□□□□ 0.58
TOP1P11387 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.67■□□□□ 0.58
TOP1P11387 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP1P11387 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOP1P11387 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TOP1P11387 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.67■□□□□ 0.58
TOP1P11387 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.66■□□□□ 0.58
TOP1P11387 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.66■□□□□ 0.58
TOP1P11387 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 REXO1L1P-202ENST00000608646 1974 ntBASIC18.66■□□□□ 0.58
TOP1P11387 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.66■□□□□ 0.58
TOP1P11387 NFIC-211ENST00000641145 8399 ntBASIC18.66■□□□□ 0.58
TOP1P11387 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TOP1P11387 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.66■□□□□ 0.58
TOP1P11387 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.66■□□□□ 0.58
TOP1P11387 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
TOP1P11387 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms