Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 KRT43P-201ENST00000434019 910 ntBASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 SLC25A47P1-201ENST00000531577 414 ntBASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 AC069224.1-201ENST00000566372 1715 ntBASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SPHK2Q9NRA0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 AC124067.4-201ENST00000519691 2379 ntBASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 AL133267.1-201ENST00000398220 340 ntBASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 BOLA2P3-201ENST00000404566 256 ntBASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 CROCCP4-201ENST00000457096 498 ntBASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 MIR4313-201ENST00000580760 101 ntBASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 AC020916.1-201ENST00000587762 1774 ntBASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 AC018665.1-201ENST00000622927 1362 ntBASIC16.12■□□□□ 0.17
SPHK2Q9NRA0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK2Q9NRA0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SPHK2Q9NRA0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK2Q9NRA0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPHK2Q9NRA0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms