Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ATP6V0A4Q9HBG4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATP6V0A4Q9HBG4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
ATP6V0A4Q9HBG4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATP6V0A4Q9HBG4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.71■□□□□ 0.42
ATP6V0A4Q9HBG4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 AC025048.3-201ENST00000590609 569 ntBASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 AC005702.4-201ENST00000618393 416 ntBASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 AL109936.8-201ENST00000641772 604 ntBASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ATP6V0A4Q9HBG4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 AC114501.2-201ENST00000439631 535 ntBASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 KRT17P7-201ENST00000451704 1104 ntBASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A4Q9HBG4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 AC011477.6-201ENST00000604980 1927 ntBASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
ATP6V0A4Q9HBG4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms