Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 PIN1P1-201ENST00000412108 996 ntBASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 AC027307.3-201ENST00000594262 1100 ntBASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 SPTSSB-204ENST00000617024 1292 ntBASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 AC105917.1-201ENST00000506637 2539 ntBASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC33Q8N5R6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 LINC02447-202ENST00000501888 2146 ntBASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 AL353705.2-201ENST00000428243 662 ntBASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 CDC14C-201ENST00000428251 1719 ntBASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC33Q8N5R6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 HLA-V-204ENST00000476601 1289 ntBASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 AL589739.1-201ENST00000607720 493 ntBASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 AC025048.6-201ENST00000634326 1161 ntBASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms