Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AC093724.1-201ENST00000448659 1027 ntBASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 RN7SL560P-201ENST00000577943 264 ntBASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 AC009542.2-202ENST00000619004 1067 ntBASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 AL139011.1-202ENST00000642063 584 ntBASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RP1L1Q8IWN7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 AL022328.3-201ENST00000607943 679 ntBASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 AL391069.4-201ENST00000609583 481 ntBASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 AP001094.4-201ENST00000579008 2176 ntBASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 YBX1P6-201ENST00000442962 1002 ntBASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 AL139010.1-201ENST00000454878 894 ntBASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RP1L1Q8IWN7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 AL355864.2-201ENST00000447420 863 ntBASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 LINC02012-201ENST00000608206 1725 ntBASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RP1L1Q8IWN7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms