Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 DBET-201ENST00000630918 3363 ntBASIC16.61■□□□□ 0.25
RFX6Q8HWS3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX6Q8HWS3 ELL2P1-201ENST00000413990 1906 ntBASIC16.6■□□□□ 0.25
RFX6Q8HWS3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 RPS8P6-201ENST00000426177 609 ntBASIC16.6■□□□□ 0.25
RFX6Q8HWS3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 AC005829.1-201ENST00000570002 483 ntBASIC16.6■□□□□ 0.25
RFX6Q8HWS3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 AC136621.1-201ENST00000624017 2304 ntBASIC16.6■□□□□ 0.25
RFX6Q8HWS3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 PPT1-215ENST00000641471 2368 ntBASIC16.6■□□□□ 0.25
RFX6Q8HWS3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 AC020658.6-201ENST00000623564 1870 ntBASIC16.6■□□□□ 0.25
RFX6Q8HWS3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 AP3S2-216ENST00000617003 1561 ntBASIC16.6■□□□□ 0.25
RFX6Q8HWS3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.6■□□□□ 0.25
RFX6Q8HWS3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 AC092127.1-201ENST00000567093 3455 ntBASIC16.59■□□□□ 0.25
RFX6Q8HWS3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.59■□□□□ 0.25
RFX6Q8HWS3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 AC004987.2-201ENST00000395959 1148 ntBASIC16.59■□□□□ 0.25
RFX6Q8HWS3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 AC005237.2-201ENST00000434368 219 ntBASIC16.59■□□□□ 0.25
RFX6Q8HWS3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 AC013268.4-201ENST00000637413 2228 ntBASIC16.59■□□□□ 0.25
RFX6Q8HWS3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 SSR4P1-203ENST00000599569 2260 ntBASIC16.59■□□□□ 0.25
RFX6Q8HWS3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 AP002414.2-201ENST00000591780 3365 ntBASIC16.59■□□□□ 0.25
RFX6Q8HWS3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFX6Q8HWS3 AC022532.1-201ENST00000624563 1728 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms