Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO1Q2MKA7 CETN4P-206ENST00000642099 2168 ntBASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 AL138828.2-201ENST00000615812 383 ntBASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 AL033527.5-202ENST00000641632 1098 ntBASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 AC023157.3-201ENST00000619086 2088 ntBASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO1Q2MKA7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 HLA-V-204ENST00000476601 1289 ntBASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 AC025678.2-201ENST00000562061 970 ntBASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 AC004449.1-201ENST00000564240 433 ntBASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.72□□□□□ -0.21
RSPO1Q2MKA7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms