Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 IGHV3-71-201ENST00000523324 359 ntBASIC19.08■□□□□ 0.65
RFX7Q2KHR2 AC106886.1-201ENST00000568660 600 ntBASIC19.08■□□□□ 0.65
RFX7Q2KHR2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFX7Q2KHR2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.08■□□□□ 0.64
RFX7Q2KHR2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 ACA64.2-201ENST00000459014 129 ntBASIC19.07■□□□□ 0.64
RFX7Q2KHR2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 RARRES2P5-201ENST00000564013 466 ntBASIC19.07■□□□□ 0.64
RFX7Q2KHR2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 AL008721.1-201ENST00000609964 604 ntBASIC19.07■□□□□ 0.64
RFX7Q2KHR2 AL162274.1-201ENST00000617191 1098 ntBASIC19.07■□□□□ 0.64
RFX7Q2KHR2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 AC105250.1-201ENST00000509378 2057 ntBASIC19.07■□□□□ 0.64
RFX7Q2KHR2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX7Q2KHR2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 AL359881.2-201ENST00000602973 570 ntBASIC19.06■□□□□ 0.64
RFX7Q2KHR2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms