Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CDC42P60953 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC42P60953 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42P60953 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.63□□□□□ -0.07
CDC42P60953 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42P60953 AC005089.1-201ENST00000619486 2241 ntBASIC14.63□□□□□ -0.07
CDC42P60953 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.63□□□□□ -0.07
CDC42P60953 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 SNX18-202ENST00000343017 3140 ntBASIC14.63□□□□□ -0.07
CDC42P60953 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDC42P60953 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDC42P60953 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
CDC42P60953 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.62□□□□□ -0.07
CDC42P60953 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC42P60953 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CDC42P60953 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
CDC42P60953 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.62□□□□□ -0.07
CDC42P60953 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.62□□□□□ -0.07
CDC42P60953 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 KRT18P35-201ENST00000510488 1269 ntBASIC14.62□□□□□ -0.07
CDC42P60953 AC136632.2-201ENST00000512891 861 ntBASIC14.62□□□□□ -0.07
CDC42P60953 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.62□□□□□ -0.07
CDC42P60953 AC025062.2-201ENST00000605477 670 ntBASIC14.62□□□□□ -0.07
CDC42P60953 AC008667.4-201ENST00000607370 168 ntBASIC14.62□□□□□ -0.07
CDC42P60953 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDC42P60953 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC42P60953 AL358472.4-201ENST00000633140 710 ntBASIC14.62□□□□□ -0.07
CDC42P60953 AC107918.4-202ENST00000641623 219 ntBASIC14.62□□□□□ -0.07
CDC42P60953 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDC42P60953 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC42P60953 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC42P60953 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42P60953 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC42P60953 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CDC42P60953 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC42P60953 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 AGAP7P-201ENST00000582299 2062 ntBASIC14.61□□□□□ -0.07
CDC42P60953 AGAP14-201ENST00000624701 2060 ntBASIC14.61□□□□□ -0.07
CDC42P60953 WASH6P-202ENST00000359512 1437 ntBASIC14.61□□□□□ -0.07
CDC42P60953 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDC42P60953 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC42P60953 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.61□□□□□ -0.07
CDC42P60953 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDC42P60953 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42P60953 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
CDC42P60953 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms