Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR1H2P55055 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.21■□□□□ 0.02
NR1H2P55055 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NR1H2P55055 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NR1H2P55055 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NR1H2P55055 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.21■□□□□ 0.02
NR1H2P55055 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
NR1H2P55055 AC092919.2-201ENST00000623631 1645 ntBASIC15.21■□□□□ 0.02
NR1H2P55055 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NR1H2P55055 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.21■□□□□ 0.02
NR1H2P55055 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
NR1H2P55055 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NR1H2P55055 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.2■□□□□ 0.02
NR1H2P55055 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.2■□□□□ 0.02
NR1H2P55055 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NR1H2P55055 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NR1H2P55055 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.2■□□□□ 0.02
NR1H2P55055 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.2■□□□□ 0.02
NR1H2P55055 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 AC015656.1-201ENST00000624209 3578 ntBASIC15.2■□□□□ 0.02
NR1H2P55055 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 KLF4P1-201ENST00000412782 1185 ntBASIC15.2■□□□□ 0.02
NR1H2P55055 KRT18P27-201ENST00000427733 1299 ntBASIC15.2■□□□□ 0.02
NR1H2P55055 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 SIGLEC30P-201ENST00000455569 941 ntBASIC15.2■□□□□ 0.02
NR1H2P55055 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NR1H2P55055 UNC93B6-202ENST00000528242 690 ntBASIC15.2■□□□□ 0.02
NR1H2P55055 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 AC040169.1-201ENST00000565382 521 ntBASIC15.2■□□□□ 0.02
NR1H2P55055 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.2■□□□□ 0.02
NR1H2P55055 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.2■□□□□ 0.02
NR1H2P55055 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.2■□□□□ 0.02
NR1H2P55055 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.2■□□□□ 0.02
NR1H2P55055 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 AC005252.3-201ENST00000623855 2258 ntBASIC15.2■□□□□ 0.02
NR1H2P55055 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NR1H2P55055 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NR1H2P55055 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NR1H2P55055 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.2■□□□□ 0.02
NR1H2P55055 AP002414.3-201ENST00000589352 1468 ntBASIC15.2■□□□□ 0.02
NR1H2P55055 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H2P55055 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H2P55055 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.19■□□□□ 0.02
NR1H2P55055 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H2P55055 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H2P55055 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H2P55055 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H2P55055 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.19■□□□□ 0.02
NR1H2P55055 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NR1H2P55055 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H2P55055 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H2P55055 AC006277.1-201ENST00000624348 1610 ntBASIC15.19■□□□□ 0.02
NR1H2P55055 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NR1H2P55055 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 DNAJB3-201ENST00000446806 729 ntBASIC15.19■□□□□ 0.02
NR1H2P55055 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
NR1H2P55055 POU5F1P6-201ENST00000466990 990 ntBASIC15.19■□□□□ 0.02
NR1H2P55055 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NR1H2P55055 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H2P55055 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NR1H2P55055 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H2P55055 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.19■□□□□ 0.02
NR1H2P55055 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H2P55055 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NR1H2P55055 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H2P55055 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms