Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.54□□□□□ -0.24
VAMP1P23763 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
VAMP1P23763 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VAMP1P23763 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.54□□□□□ -0.24
VAMP1P23763 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VAMP1P23763 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.53□□□□□ -0.24
VAMP1P23763 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VAMP1P23763 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 AC090616.6-203ENST00000579186 1945 ntBASIC13.53□□□□□ -0.24
VAMP1P23763 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VAMP1P23763 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
VAMP1P23763 AC026396.1-201ENST00000419388 421 ntBASIC13.53□□□□□ -0.24
VAMP1P23763 AC087163.2-201ENST00000457299 853 ntBASIC13.53□□□□□ -0.24
VAMP1P23763 AL671277.2-201ENST00000458060 996 ntBASIC13.53□□□□□ -0.24
VAMP1P23763 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.53□□□□□ -0.24
VAMP1P23763 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.53□□□□□ -0.24
VAMP1P23763 AC087641.1-201ENST00000557561 1021 ntBASIC13.53□□□□□ -0.24
VAMP1P23763 NTF6B-201ENST00000591913 560 ntBASIC13.53□□□□□ -0.24
VAMP1P23763 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.53□□□□□ -0.24
VAMP1P23763 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 AC092127.1-201ENST00000567093 3455 ntBASIC13.53□□□□□ -0.24
VAMP1P23763 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 LINC00552-201ENST00000625151 2579 ntBASIC13.53□□□□□ -0.24
VAMP1P23763 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.53□□□□□ -0.24
VAMP1P23763 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.53□□□□□ -0.24
VAMP1P23763 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VAMP1P23763 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VAMP1P23763 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.52□□□□□ -0.24
VAMP1P23763 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP1P23763 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP1P23763 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP1P23763 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP1P23763 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP1P23763 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VAMP1P23763 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.52□□□□□ -0.24
VAMP1P23763 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.52□□□□□ -0.24
VAMP1P23763 NTM-206ENST00000427481 2583 ntTSL 5 BASIC13.52□□□□□ -0.24
VAMP1P23763 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.52□□□□□ -0.24
VAMP1P23763 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
VAMP1P23763 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.52□□□□□ -0.24
VAMP1P23763 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.52□□□□□ -0.25
VAMP1P23763 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.52□□□□□ -0.25
VAMP1P23763 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.52□□□□□ -0.25
VAMP1P23763 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.52□□□□□ -0.25
VAMP1P23763 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.52□□□□□ -0.25
VAMP1P23763 PAWRP1-201ENST00000451083 565 ntBASIC13.52□□□□□ -0.25
VAMP1P23763 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.52□□□□□ -0.25
VAMP1P23763 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.52□□□□□ -0.25
VAMP1P23763 BNIP3P18-201ENST00000593976 575 ntBASIC13.52□□□□□ -0.25
VAMP1P23763 Z69720.1-201ENST00000601483 472 ntBASIC13.52□□□□□ -0.25
VAMP1P23763 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 REXO1L3P-201ENST00000622202 1288 ntBASIC13.52□□□□□ -0.25
VAMP1P23763 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.52□□□□□ -0.25
VAMP1P23763 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.52□□□□□ -0.25
VAMP1P23763 AL353732.1-201ENST00000569618 1459 ntBASIC13.52□□□□□ -0.25
VAMP1P23763 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.52□□□□□ -0.25
VAMP1P23763 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms