Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AL645728.2-201ENST00000641974 660 ntBASIC14.55□□□□□ -0.08
CD53P19397 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.55□□□□□ -0.08
CD53P19397 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
CD53P19397 AC063926.2-201ENST00000623766 1308 ntBASIC14.55□□□□□ -0.08
CD53P19397 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD53P19397 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD53P19397 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.55□□□□□ -0.08
CD53P19397 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CD53P19397 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD53P19397 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.55□□□□□ -0.08
CD53P19397 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD53P19397 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CD53P19397 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD53P19397 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CD53P19397 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD53P19397 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD53P19397 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CD53P19397 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.55□□□□□ -0.08
CD53P19397 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CD53P19397 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD53P19397 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
CD53P19397 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 AC006486.2-201ENST00000624246 2199 ntBASIC14.54□□□□□ -0.08
CD53P19397 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CD53P19397 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 SSR4P1-203ENST00000599569 2260 ntBASIC14.54□□□□□ -0.08
CD53P19397 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 TFAMP1-201ENST00000412727 736 ntBASIC14.54□□□□□ -0.08
CD53P19397 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.54□□□□□ -0.08
CD53P19397 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.54□□□□□ -0.08
CD53P19397 TERF1P3-201ENST00000505638 1227 ntBASIC14.54□□□□□ -0.08
CD53P19397 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.54□□□□□ -0.08
CD53P19397 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.54□□□□□ -0.08
CD53P19397 AC087641.1-201ENST00000557561 1021 ntBASIC14.54□□□□□ -0.08
CD53P19397 AC243562.1-201ENST00000560672 389 ntBASIC14.54□□□□□ -0.08
CD53P19397 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 AP001059.3-201ENST00000619053 235 ntBASIC14.54□□□□□ -0.08
CD53P19397 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 TUBB3P1-201ENST00000405796 1332 ntBASIC14.54□□□□□ -0.08
CD53P19397 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.54□□□□□ -0.08
CD53P19397 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.54□□□□□ -0.08
CD53P19397 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.54□□□□□ -0.08
CD53P19397 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CD53P19397 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD53P19397 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CD53P19397 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CD53P19397 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.53□□□□□ -0.08
CD53P19397 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CD53P19397 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.53□□□□□ -0.08
CD53P19397 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CD53P19397 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 MIR943-201ENST00000401286 94 ntBASIC14.53□□□□□ -0.08
CD53P19397 AC236430.1-201ENST00000402231 743 ntBASIC14.53□□□□□ -0.08
CD53P19397 FAM58DP-201ENST00000428076 619 ntBASIC14.53□□□□□ -0.08
CD53P19397 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.53□□□□□ -0.08
CD53P19397 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.53□□□□□ -0.08
CD53P19397 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.53□□□□□ -0.08
CD53P19397 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD53P19397 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms