Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.67□□□□□ -0.38
IFNA1P01562 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
IFNA1P01562 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
IFNA1P01562 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.67□□□□□ -0.38
IFNA1P01562 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.67□□□□□ -0.38
IFNA1P01562 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.66□□□□□ -0.38
IFNA1P01562 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
IFNA1P01562 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.66□□□□□ -0.38
IFNA1P01562 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.66□□□□□ -0.38
IFNA1P01562 SPDYE15P-201ENST00000424157 909 ntBASIC12.66□□□□□ -0.38
IFNA1P01562 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.66□□□□□ -0.38
IFNA1P01562 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.66□□□□□ -0.38
IFNA1P01562 AC098590.1-201ENST00000468126 897 ntBASIC12.66□□□□□ -0.38
IFNA1P01562 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.66□□□□□ -0.38
IFNA1P01562 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
IFNA1P01562 AC142381.4-202ENST00000563973 229 ntBASIC12.66□□□□□ -0.38
IFNA1P01562 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.66□□□□□ -0.38
IFNA1P01562 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.66□□□□□ -0.38
IFNA1P01562 CYP2A7P1-201ENST00000595391 815 ntBASIC12.66□□□□□ -0.38
IFNA1P01562 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.66□□□□□ -0.38
IFNA1P01562 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
IFNA1P01562 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 AC005840.4-201ENST00000541242 2494 ntBASIC12.66□□□□□ -0.38
IFNA1P01562 AJ011931.1-201ENST00000618749 2492 ntBASIC12.66□□□□□ -0.38
IFNA1P01562 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
IFNA1P01562 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
IFNA1P01562 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.65□□□□□ -0.38
IFNA1P01562 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
IFNA1P01562 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.65□□□□□ -0.38
IFNA1P01562 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
IFNA1P01562 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
IFNA1P01562 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.65□□□□□ -0.38
IFNA1P01562 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.65□□□□□ -0.38
IFNA1P01562 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
IFNA1P01562 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms