Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.35■□□□□ 0.21
MT-CO1P00395 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.35■□□□□ 0.21
MT-CO1P00395 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.35■□□□□ 0.21
MT-CO1P00395 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 BNIP3P1-202ENST00000550043 1585 ntBASIC16.35■□□□□ 0.21
MT-CO1P00395 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.35■□□□□ 0.21
MT-CO1P00395 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
MT-CO1P00395 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
MT-CO1P00395 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.35■□□□□ 0.21
MT-CO1P00395 AL033527.5-202ENST00000641632 1098 ntBASIC16.35■□□□□ 0.21
MT-CO1P00395 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MT-CO1P00395 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MT-CO1P00395 AC134407.2-201ENST00000625089 1978 ntBASIC16.35■□□□□ 0.21
MT-CO1P00395 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-CO1P00395 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
MT-CO1P00395 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
MT-CO1P00395 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-CO1P00395 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-CO1P00395 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-CO1P00395 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
MT-CO1P00395 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-CO1P00395 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.34■□□□□ 0.21
MT-CO1P00395 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-CO1P00395 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-CO1P00395 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.34■□□□□ 0.21
MT-CO1P00395 HIST3H2BA-201ENST00000436555 524 ntBASIC16.34■□□□□ 0.21
MT-CO1P00395 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.34■□□□□ 0.21
MT-CO1P00395 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
MT-CO1P00395 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.34■□□□□ 0.21
MT-CO1P00395 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
MT-CO1P00395 LINC02560-201ENST00000596379 459 ntBASIC16.34■□□□□ 0.21
MT-CO1P00395 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
MT-CO1P00395 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
MT-CO1P00395 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-CO1P00395 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MT-CO1P00395 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
MT-CO1P00395 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-CO1P00395 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.34■□□□□ 0.21
MT-CO1P00395 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-CO1P00395 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
MT-CO1P00395 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
MT-CO1P00395 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.33■□□□□ 0.21
MT-CO1P00395 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.33■□□□□ 0.21
MT-CO1P00395 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MT-CO1P00395 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.33■□□□□ 0.21
MT-CO1P00395 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.33■□□□□ 0.21
MT-CO1P00395 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
MT-CO1P00395 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
MT-CO1P00395 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.33■□□□□ 0.21
MT-CO1P00395 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms