Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CTNND1O60716 AL118508.1-201ENST00000613502 2345 ntBASIC18.5■□□□□ 0.55
CTNND1O60716 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTNND1O60716 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CTNND1O60716 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.5■□□□□ 0.55
CTNND1O60716 FAM21FP-201ENST00000426241 1131 ntBASIC18.5■□□□□ 0.55
CTNND1O60716 AL355994.2-201ENST00000447882 704 ntBASIC18.5■□□□□ 0.55
CTNND1O60716 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.5■□□□□ 0.55
CTNND1O60716 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 KRT18P43-201ENST00000469825 1281 ntBASIC18.5■□□□□ 0.55
CTNND1O60716 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CTNND1O60716 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.5■□□□□ 0.55
CTNND1O60716 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CTNND1O60716 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.5■□□□□ 0.55
CTNND1O60716 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.5■□□□□ 0.55
CTNND1O60716 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CTNND1O60716 MIR6869-201ENST00000619434 62 ntBASIC18.5■□□□□ 0.55
CTNND1O60716 AC005252.2-201ENST00000624630 1141 ntBASIC18.5■□□□□ 0.55
CTNND1O60716 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CTNND1O60716 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.5■□□□□ 0.55
CTNND1O60716 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTNND1O60716 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.5■□□□□ 0.55
CTNND1O60716 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.5■□□□□ 0.55
CTNND1O60716 AC106886.4-201ENST00000623557 2502 ntBASIC18.5■□□□□ 0.55
CTNND1O60716 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.5■□□□□ 0.55
CTNND1O60716 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CTNND1O60716 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CTNND1O60716 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 AL121723.1-201ENST00000445194 1519 ntBASIC18.49■□□□□ 0.55
CTNND1O60716 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CTNND1O60716 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.49■□□□□ 0.55
CTNND1O60716 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.49■□□□□ 0.55
CTNND1O60716 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CTNND1O60716 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.49■□□□□ 0.55
CTNND1O60716 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CTNND1O60716 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.49■□□□□ 0.55
CTNND1O60716 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.49■□□□□ 0.55
CTNND1O60716 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.49■□□□□ 0.55
CTNND1O60716 RN7SL219P-201ENST00000582872 296 ntBASIC18.49■□□□□ 0.55
CTNND1O60716 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.49■□□□□ 0.55
CTNND1O60716 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.49■□□□□ 0.55
CTNND1O60716 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.49■□□□□ 0.55
CTNND1O60716 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTNND1O60716 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CTNND1O60716 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.48■□□□□ 0.55
CTNND1O60716 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 ACKR1-201ENST00000368121 1240 ntBASIC18.48■□□□□ 0.55
CTNND1O60716 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 AC016694.1-201ENST00000434179 700 ntBASIC18.48■□□□□ 0.55
CTNND1O60716 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.48■□□□□ 0.55
CTNND1O60716 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTNND1O60716 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.48■□□□□ 0.55
CTNND1O60716 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.48■□□□□ 0.55
CTNND1O60716 FTH1P14-201ENST00000482930 551 ntBASIC18.48■□□□□ 0.55
CTNND1O60716 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.48■□□□□ 0.55
CTNND1O60716 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.48■□□□□ 0.55
CTNND1O60716 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms