Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
CHD1O14646 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CHD1O14646 AC105137.3-201ENST00000617588 984 ntBASIC24.98■■□□□ 1.59
CHD1O14646 FO393412.1-201ENST00000619841 382 ntBASIC24.98■■□□□ 1.59
CHD1O14646 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHD1O14646 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
CHD1O14646 RBM38-204ENST00000371219 760 ntTSL 2 BASIC24.97■■□□□ 1.59
CHD1O14646 AL357563.1-201ENST00000404728 395 ntBASIC24.97■■□□□ 1.59
CHD1O14646 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC24.97■■□□□ 1.59
CHD1O14646 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC24.97■■□□□ 1.59
CHD1O14646 HNRNPA1P36-201ENST00000521313 955 ntBASIC24.97■■□□□ 1.59
CHD1O14646 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC24.97■■□□□ 1.59
CHD1O14646 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC24.97■■□□□ 1.59
CHD1O14646 AC026803.1-201ENST00000569130 274 ntBASIC24.97■■□□□ 1.59
CHD1O14646 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC24.97■■□□□ 1.59
CHD1O14646 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC24.97■■□□□ 1.59
CHD1O14646 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHD1O14646 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CHD1O14646 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHD1O14646 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHD1O14646 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHD1O14646 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CHD1O14646 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC24.96■■□□□ 1.59
CHD1O14646 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CHD1O14646 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHD1O14646 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHD1O14646 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHD1O14646 AL627231.1-201ENST00000394467 1125 ntBASIC24.96■■□□□ 1.59
CHD1O14646 PSMD4P1-201ENST00000433951 1109 ntBASIC24.96■■□□□ 1.59
CHD1O14646 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC24.96■■□□□ 1.59
CHD1O14646 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC24.96■■□□□ 1.59
CHD1O14646 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC24.96■■□□□ 1.59
CHD1O14646 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC24.96■■□□□ 1.59
CHD1O14646 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CHD1O14646 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC24.96■■□□□ 1.59
CHD1O14646 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC24.96■■□□□ 1.59
CHD1O14646 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CHD1O14646 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHD1O14646 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CHD1O14646 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.59
CHD1O14646 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.59
CHD1O14646 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
CHD1O14646 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
CHD1O14646 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CHD1O14646 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC24.95■■□□□ 1.59
CHD1O14646 PLS3-210ENST00000626746 216 ntTSL 4 BASIC24.95■■□□□ 1.59
CHD1O14646 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CHD1O14646 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC24.95■■□□□ 1.58
CHD1O14646 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC24.95■■□□□ 1.58
CHD1O14646 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC24.95■■□□□ 1.58
CHD1O14646 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC24.95■■□□□ 1.58
CHD1O14646 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC24.95■■□□□ 1.58
CHD1O14646 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHD1O14646 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1O14646 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD1O14646 AL008718.2-201ENST00000609206 1313 ntBASIC24.94■■□□□ 1.58
CHD1O14646 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1O14646 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1O14646 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
CHD1O14646 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
CHD1O14646 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD1O14646 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD1O14646 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1O14646 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC24.94■■□□□ 1.58
CHD1O14646 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
CHD1O14646 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1O14646 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1O14646 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC24.94■■□□□ 1.58
CHD1O14646 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC24.94■■□□□ 1.58
CHD1O14646 AL645937.2-201ENST00000396808 931 ntBASIC24.94■■□□□ 1.58
CHD1O14646 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC24.94■■□□□ 1.58
CHD1O14646 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1O14646 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD1O14646 AC027139.1-201ENST00000565286 951 ntBASIC24.94■■□□□ 1.58
CHD1O14646 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1O14646 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CHD1O14646 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD1O14646 AC078925.2-201ENST00000624013 1973 ntBASIC24.94■■□□□ 1.58
CHD1O14646 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CHD1O14646 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1O14646 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1O14646 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC24.93■■□□□ 1.58
CHD1O14646 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC24.93■■□□□ 1.58
CHD1O14646 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC24.93■■□□□ 1.58
CHD1O14646 AL157813.1-201ENST00000612996 587 ntBASIC24.93■■□□□ 1.58
CHD1O14646 AC025262.2-201ENST00000623975 1056 ntBASIC24.93■■□□□ 1.58
CHD1O14646 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1O14646 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms