Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ALK-205ENST00000618119 4646 ntTSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 RHPN1-AS1-201ENST00000518049 1918 ntBASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AP001267.2-201ENST00000532619 2086 ntBASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 POM121L13P-201ENST00000422362 380 ntBASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 RASA4CP-201ENST00000424092 1398 ntBASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AL135905.2-201ENST00000584934 1404 ntBASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 PCGF3-213ENST00000620529 1899 ntBASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LINC01558Q9Y6Z2 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms