Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 AC003669.1-201ENST00000334569 611 ntBASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 AC009947.2-201ENST00000444014 672 ntBASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 LINC01238-205ENST00000567549 1107 ntBASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 AD001527.2-201ENST00000622994 785 ntBASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 AL353593.2-201ENST00000602529 1483 ntBASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAPPC1Q9Y5R8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 AC092666.2-201ENST00000613287 246 ntBASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 AC133041.1-202ENST00000642053 222 ntBASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms