Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
EYA3Q99504 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EYA3Q99504 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.22■□□□□ 0.67
EYA3Q99504 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EYA3Q99504 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.22■□□□□ 0.67
EYA3Q99504 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
EYA3Q99504 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
EYA3Q99504 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
EYA3Q99504 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 AC026954.1-201ENST00000429771 1293 ntBASIC19.21■□□□□ 0.67
EYA3Q99504 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.21■□□□□ 0.67
EYA3Q99504 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.21■□□□□ 0.67
EYA3Q99504 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.21■□□□□ 0.67
EYA3Q99504 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
EYA3Q99504 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.21■□□□□ 0.67
EYA3Q99504 DUX4L45-201ENST00000566406 1057 ntBASIC19.21■□□□□ 0.67
EYA3Q99504 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.21■□□□□ 0.67
EYA3Q99504 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.21■□□□□ 0.67
EYA3Q99504 AC008687.7-202ENST00000637404 953 ntBASIC19.21■□□□□ 0.67
EYA3Q99504 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
EYA3Q99504 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.21■□□□□ 0.67
EYA3Q99504 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EYA3Q99504 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.21■□□□□ 0.67
EYA3Q99504 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.21■□□□□ 0.67
EYA3Q99504 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
EYA3Q99504 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EYA3Q99504 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.2■□□□□ 0.66
EYA3Q99504 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.2■□□□□ 0.66
EYA3Q99504 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EYA3Q99504 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EYA3Q99504 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
EYA3Q99504 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.2■□□□□ 0.66
EYA3Q99504 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EYA3Q99504 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 AC099548.2-209ENST00000480264 625 ntBASIC19.2■□□□□ 0.66
EYA3Q99504 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EYA3Q99504 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.2■□□□□ 0.66
EYA3Q99504 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.2■□□□□ 0.66
EYA3Q99504 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.2■□□□□ 0.66
EYA3Q99504 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
EYA3Q99504 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
EYA3Q99504 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
EYA3Q99504 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
EYA3Q99504 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EYA3Q99504 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
EYA3Q99504 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.19■□□□□ 0.66
EYA3Q99504 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 ME2P1-201ENST00000426028 1970 ntBASIC19.19■□□□□ 0.66
EYA3Q99504 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 DRD5P1-201ENST00000456605 1438 ntBASIC19.19■□□□□ 0.66
EYA3Q99504 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.19■□□□□ 0.66
EYA3Q99504 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.19■□□□□ 0.66
EYA3Q99504 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
EYA3Q99504 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
EYA3Q99504 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.19■□□□□ 0.66
EYA3Q99504 RN7SL560P-201ENST00000577943 264 ntBASIC19.19■□□□□ 0.66
EYA3Q99504 AC009542.2-202ENST00000619004 1067 ntBASIC19.19■□□□□ 0.66
EYA3Q99504 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
EYA3Q99504 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.19■□□□□ 0.66
EYA3Q99504 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
EYA3Q99504 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.19■□□□□ 0.66
EYA3Q99504 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EYA3Q99504 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms