Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.12■□□□□ 0.01
NSMCE2Q96MF7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 MRPL20P1-201ENST00000400819 433 ntBASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 ACTL9-202ENST00000612068 1252 ntBASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 AC134407.2-201ENST00000625089 1978 ntBASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NSMCE2Q96MF7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 AGAP7P-201ENST00000582299 2062 ntBASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 AGAP14-201ENST00000624701 2060 ntBASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 AL121772.3-201ENST00000610840 674 ntBASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 MIR1199-201ENST00000621445 119 ntBASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 AC005089.1-201ENST00000619486 2241 ntBASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 AC013726.1-201ENST00000563747 2285 ntBASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NSMCE2Q96MF7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms