Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAX2Q96IS3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAX2Q96IS3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAX2Q96IS3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.51□□□□□ -0.41
RAX2Q96IS3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAX2Q96IS3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAX2Q96IS3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.51□□□□□ -0.41
RAX2Q96IS3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAX2Q96IS3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAX2Q96IS3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.51□□□□□ -0.41
RAX2Q96IS3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.51□□□□□ -0.41
RAX2Q96IS3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.51□□□□□ -0.41
RAX2Q96IS3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 OR2I1P-209ENST00000641730 5365 ntBASIC12.5□□□□□ -0.41
RAX2Q96IS3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 SERBP1P5-201ENST00000510079 1181 ntBASIC12.5□□□□□ -0.41
RAX2Q96IS3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 AC026979.3-201ENST00000607315 403 ntBASIC12.5□□□□□ -0.41
RAX2Q96IS3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RAX2Q96IS3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAX2Q96IS3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 AC087499.5-201ENST00000452760 1342 ntBASIC12.49□□□□□ -0.41
RAX2Q96IS3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 AL080243.2-201ENST00000418783 582 ntBASIC12.49□□□□□ -0.41
RAX2Q96IS3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 AC190387.1-201ENST00000551683 408 ntBASIC12.49□□□□□ -0.41
RAX2Q96IS3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.49□□□□□ -0.41
RAX2Q96IS3 PCDHB19P-201ENST00000570871 2371 ntBASIC12.49□□□□□ -0.41
RAX2Q96IS3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAX2Q96IS3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms