Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 AZGP1P1-201ENST00000411909 902 ntBASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 RRP7BP-205ENST00000566851 833 ntBASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 WFDC1-204ENST00000613603 549 ntBASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 MIR8072-201ENST00000614241 80 ntBASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHKBP1Q8TBC3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 Z97205.2-201ENST00000564697 1639 ntBASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 AC004987.2-201ENST00000395959 1148 ntBASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 AC112492.5-201ENST00000421897 457 ntBASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 TTTY23B-201ENST00000442790 549 ntBASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 EEF1DP4-201ENST00000446006 880 ntBASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 ACA64.2-201ENST00000459014 129 ntBASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 RARRES2P5-201ENST00000564013 466 ntBASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 LINC01115-203ENST00000606068 577 ntBASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.71■□□□□ 0.27
SHKBP1Q8TBC3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.71■□□□□ 0.26
SHKBP1Q8TBC3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SHKBP1Q8TBC3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 AC144831.1-201ENST00000573312 2656 ntBASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHKBP1Q8TBC3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms