Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 AC132872.4-202ENST00000622924 2756 ntBASIC13.98□□□□□ -0.17
CPEB3Q8NE35 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 AL133215.2-201ENST00000609242 977 ntBASIC13.98□□□□□ -0.17
CPEB3Q8NE35 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 AP005117.1-202ENST00000581724 1908 ntBASIC13.98□□□□□ -0.17
CPEB3Q8NE35 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.98□□□□□ -0.17
CPEB3Q8NE35 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 MIR600HG-201ENST00000449175 5984 ntBASIC13.97□□□□□ -0.17
CPEB3Q8NE35 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 METTL21AP1-201ENST00000438852 635 ntBASIC13.97□□□□□ -0.17
CPEB3Q8NE35 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.97□□□□□ -0.17
CPEB3Q8NE35 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.97□□□□□ -0.17
CPEB3Q8NE35 AC063926.3-201ENST00000624734 5658 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms