Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 AP005117.1-202ENST00000581724 1908 ntBASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 RPL13P2-201ENST00000440687 659 ntBASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 AC092364.2-202ENST00000597012 1073 ntBASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 LINC02199-201ENST00000506655 2702 ntBASIC15.71■□□□□ 0.11
TRAM1L1Q8N609 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAM1L1Q8N609 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TRAM1L1Q8N609 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAM1L1Q8N609 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
TRAM1L1Q8N609 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAM1L1Q8N609 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAM1L1Q8N609 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 SLED1-202ENST00000512051 380 ntBASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 TIMM17BP1-201ENST00000545713 516 ntBASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 AC104794.3-201ENST00000566840 1248 ntBASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 SRD5A3P1-201ENST00000603021 949 ntBASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 LINC01115-203ENST00000606068 577 ntBASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAM1L1Q8N609 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAM1L1Q8N609 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAM1L1Q8N609 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAM1L1Q8N609 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAM1L1Q8N609 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAM1L1Q8N609 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAM1L1Q8N609 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAM1L1Q8N609 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAM1L1Q8N609 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAM1L1Q8N609 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms