Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZNF440Q8IYI8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZNF440Q8IYI8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.58□□□□□ -0.07
ZNF440Q8IYI8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZNF440Q8IYI8 TMBIM7P-203ENST00000641617 1718 ntBASIC14.58□□□□□ -0.07
ZNF440Q8IYI8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 FO393414.2-201ENST00000405153 598 ntBASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.58□□□□□ -0.08
ZNF440Q8IYI8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 MIR600HG-201ENST00000449175 5984 ntBASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 CICP6-201ENST00000457191 2729 ntBASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 GPS2P2-201ENST00000430745 888 ntBASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 SPDYE14P-201ENST00000442619 822 ntBASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 AP006288.1-201ENST00000446065 395 ntBASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 AC026150.2-201ENST00000564693 1156 ntBASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 MIR4313-201ENST00000580760 101 ntBASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 AP001059.3-201ENST00000619053 235 ntBASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ZNF440Q8IYI8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms