Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A12P48065 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
SLC6A12P48065 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A12P48065 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC6A12P48065 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SLC6A12P48065 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC6A12P48065 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A12P48065 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC6A12P48065 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.34■□□□□ 0.05
SLC6A12P48065 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC6A12P48065 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC6A12P48065 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC6A12P48065 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.34■□□□□ 0.05
SLC6A12P48065 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC6A12P48065 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A12P48065 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
SLC6A12P48065 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC6A12P48065 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC6A12P48065 Z92544.3-201ENST00000624747 417 ntBASIC15.34■□□□□ 0.05
SLC6A12P48065 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC6A12P48065 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC6A12P48065 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC6A12P48065 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC6A12P48065 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC6A12P48065 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC6A12P48065 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC6A12P48065 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC6A12P48065 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC6A12P48065 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A12P48065 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A12P48065 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A12P48065 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A12P48065 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A12P48065 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A12P48065 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A12P48065 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A12P48065 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.33■□□□□ 0.05
SLC6A12P48065 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.05
SLC6A12P48065 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC6A12P48065 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A12P48065 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC6A12P48065 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC6A12P48065 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC6A12P48065 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
SLC6A12P48065 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC6A12P48065 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC6A12P48065 RPL37AP1-201ENST00000412502 279 ntBASIC15.33■□□□□ 0.04
SLC6A12P48065 TARDBPP1-201ENST00000442013 1203 ntBASIC15.33■□□□□ 0.04
SLC6A12P48065 CNN2P2-201ENST00000443536 909 ntBASIC15.33■□□□□ 0.04
SLC6A12P48065 CNN2P3-201ENST00000450201 906 ntBASIC15.33■□□□□ 0.04
SLC6A12P48065 HLA-V-204ENST00000476601 1289 ntBASIC15.33■□□□□ 0.04
SLC6A12P48065 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC6A12P48065 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC6A12P48065 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC6A12P48065 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC6A12P48065 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 AL136317.3-201ENST00000618497 906 ntBASIC15.33■□□□□ 0.04
SLC6A12P48065 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC6A12P48065 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SLC6A12P48065 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC6A12P48065 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC6A12P48065 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC6A12P48065 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms