Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGCLP35914 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
HMGCLP35914 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HMGCLP35914 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HMGCLP35914 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGCLP35914 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.84■□□□□ 0.13
HMGCLP35914 BTBD7P1-201ENST00000447253 1453 ntBASIC15.84■□□□□ 0.13
HMGCLP35914 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGCLP35914 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HMGCLP35914 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCLP35914 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGCLP35914 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGCLP35914 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.83■□□□□ 0.13
HMGCLP35914 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.83■□□□□ 0.13
HMGCLP35914 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
HMGCLP35914 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HMGCLP35914 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGCLP35914 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HMGCLP35914 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.83■□□□□ 0.12
HMGCLP35914 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.83■□□□□ 0.12
HMGCLP35914 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.83■□□□□ 0.12
HMGCLP35914 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGCLP35914 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.83■□□□□ 0.12
HMGCLP35914 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HMGCLP35914 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HMGCLP35914 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGCLP35914 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HMGCLP35914 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HMGCLP35914 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HMGCLP35914 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGCLP35914 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HMGCLP35914 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGCLP35914 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.83■□□□□ 0.12
HMGCLP35914 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HMGCLP35914 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCLP35914 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGCLP35914 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HMGCLP35914 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.82■□□□□ 0.12
HMGCLP35914 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGCLP35914 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGCLP35914 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGCLP35914 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGCLP35914 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HMGCLP35914 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGCLP35914 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGCLP35914 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.82■□□□□ 0.12
HMGCLP35914 AC093214.1-201ENST00000511688 1107 ntBASIC15.82■□□□□ 0.12
HMGCLP35914 RNA5SP421-201ENST00000516864 134 ntBASIC15.82■□□□□ 0.12
HMGCLP35914 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.82■□□□□ 0.12
HMGCLP35914 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGCLP35914 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGCLP35914 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.82■□□□□ 0.12
HMGCLP35914 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.82■□□□□ 0.12
HMGCLP35914 AC074044.1-201ENST00000609673 707 ntBASIC15.82■□□□□ 0.12
HMGCLP35914 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 CICP13-201ENST00000422015 2789 ntBASIC15.82■□□□□ 0.12
HMGCLP35914 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HMGCLP35914 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCLP35914 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms