Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.83□□□□□ -0.04
LCN1P31025 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.83□□□□□ -0.04
LCN1P31025 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.83□□□□□ -0.04
LCN1P31025 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LCN1P31025 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
LCN1P31025 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.83□□□□□ -0.04
LCN1P31025 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 AC067930.6-201ENST00000623257 4947 ntBASIC14.83□□□□□ -0.04
LCN1P31025 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LCN1P31025 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
LCN1P31025 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LCN1P31025 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.82□□□□□ -0.04
LCN1P31025 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 LINC02228-204ENST00000642115 2962 ntBASIC14.82□□□□□ -0.04
LCN1P31025 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LCN1P31025 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.82□□□□□ -0.04
LCN1P31025 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LCN1P31025 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.82□□□□□ -0.04
LCN1P31025 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LCN1P31025 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.82□□□□□ -0.04
LCN1P31025 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.82□□□□□ -0.04
LCN1P31025 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.82□□□□□ -0.04
LCN1P31025 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LCN1P31025 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.82□□□□□ -0.04
LCN1P31025 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.82□□□□□ -0.04
LCN1P31025 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.82□□□□□ -0.04
LCN1P31025 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.82□□□□□ -0.04
LCN1P31025 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LCN1P31025 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.82□□□□□ -0.04
LCN1P31025 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCN1P31025 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.82□□□□□ -0.04
LCN1P31025 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LCN1P31025 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LCN1P31025 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.81□□□□□ -0.04
LCN1P31025 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.81□□□□□ -0.04
LCN1P31025 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.81□□□□□ -0.04
LCN1P31025 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.81□□□□□ -0.04
LCN1P31025 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.81□□□□□ -0.04
LCN1P31025 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 SPDYE14P-201ENST00000442619 822 ntBASIC14.81□□□□□ -0.04
LCN1P31025 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.81□□□□□ -0.04
LCN1P31025 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.81□□□□□ -0.04
LCN1P31025 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.81□□□□□ -0.04
LCN1P31025 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LCN1P31025 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 AC026150.2-201ENST00000564693 1156 ntBASIC14.81□□□□□ -0.04
LCN1P31025 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.81□□□□□ -0.04
LCN1P31025 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.81□□□□□ -0.04
LCN1P31025 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LCN1P31025 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.81□□□□□ -0.04
LCN1P31025 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.81□□□□□ -0.04
LCN1P31025 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.81□□□□□ -0.04
LCN1P31025 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
LCN1P31025 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LCN1P31025 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCN1P31025 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms