Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PTPN3P26045 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
PTPN3P26045 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN3P26045 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN3P26045 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN3P26045 AZGP1P1-201ENST00000411909 902 ntBASIC16.25■□□□□ 0.19
PTPN3P26045 SPDYE17-201ENST00000412399 783 ntBASIC16.25■□□□□ 0.19
PTPN3P26045 SPDYE7P-202ENST00000420373 878 ntBASIC16.25■□□□□ 0.19
PTPN3P26045 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN3P26045 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN3P26045 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.25■□□□□ 0.19
PTPN3P26045 HNRNPUP1-201ENST00000554987 333 ntBASIC16.25■□□□□ 0.19
PTPN3P26045 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN3P26045 LINC00628-201ENST00000628516 1289 ntBASIC16.25■□□□□ 0.19
PTPN3P26045 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN3P26045 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PTPN3P26045 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN3P26045 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 SSR4P1-203ENST00000599569 2260 ntBASIC16.25■□□□□ 0.19
PTPN3P26045 AL035456.1-201ENST00000456064 1369 ntBASIC16.25■□□□□ 0.19
PTPN3P26045 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 AC136621.1-201ENST00000624017 2304 ntBASIC16.24■□□□□ 0.19
PTPN3P26045 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN3P26045 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.24■□□□□ 0.19
PTPN3P26045 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.24■□□□□ 0.19
PTPN3P26045 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 AC073347.1-201ENST00000421633 2643 ntBASIC16.24■□□□□ 0.19
PTPN3P26045 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN3P26045 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN3P26045 AC105250.1-201ENST00000509378 2057 ntBASIC16.24■□□□□ 0.19
PTPN3P26045 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 AL139400.1-201ENST00000366220 510 ntBASIC16.24■□□□□ 0.19
PTPN3P26045 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN3P26045 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 HLA-J-203ENST00000494367 1087 ntBASIC16.24■□□□□ 0.19
PTPN3P26045 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.24■□□□□ 0.19
PTPN3P26045 AC109322.1-201ENST00000524499 1264 ntBASIC16.24■□□□□ 0.19
PTPN3P26045 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN3P26045 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN3P26045 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
PTPN3P26045 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN3P26045 AC097359.3-201ENST00000603982 1210 ntBASIC16.24■□□□□ 0.19
PTPN3P26045 AL691403.2-201ENST00000618460 490 ntBASIC16.24■□□□□ 0.19
PTPN3P26045 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN3P26045 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PTPN3P26045 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTPN3P26045 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN3P26045 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN3P26045 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN3P26045 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 PPT1-215ENST00000641471 2368 ntBASIC16.23■□□□□ 0.19
PTPN3P26045 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
PTPN3P26045 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PTPN3P26045 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN3P26045 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPN3P26045 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN3P26045 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms