Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 AL589702.1-201ENST00000641229 1509 ntBASIC15.72■□□□□ 0.11
CDH3P22223 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH3P22223 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 FO538757.1-201ENST00000623083 1397 ntBASIC15.72■□□□□ 0.11
CDH3P22223 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH3P22223 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH3P22223 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH3P22223 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH3P22223 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH3P22223 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.71■□□□□ 0.11
CDH3P22223 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 BASP1P1-201ENST00000430708 665 ntBASIC15.71■□□□□ 0.11
CDH3P22223 AC055876.3-201ENST00000431496 288 ntBASIC15.71■□□□□ 0.11
CDH3P22223 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.71■□□□□ 0.11
CDH3P22223 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH3P22223 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.71■□□□□ 0.11
CDH3P22223 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH3P22223 AC138649.4-201ENST00000612222 287 ntBASIC15.71■□□□□ 0.11
CDH3P22223 AC007967.4-201ENST00000614700 386 ntBASIC15.71■□□□□ 0.11
CDH3P22223 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CDH3P22223 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH3P22223 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH3P22223 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.71■□□□□ 0.1
CDH3P22223 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CDH3P22223 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH3P22223 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH3P22223 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.71■□□□□ 0.1
CDH3P22223 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CDH3P22223 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH3P22223 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH3P22223 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH3P22223 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDH3P22223 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDH3P22223 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH3P22223 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.7■□□□□ 0.1
CDH3P22223 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH3P22223 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 U82695.1-201ENST00000635752 1889 ntBASIC15.7■□□□□ 0.1
CDH3P22223 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDH3P22223 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH3P22223 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH3P22223 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH3P22223 MTND6P24-201ENST00000440466 518 ntBASIC15.7■□□□□ 0.1
CDH3P22223 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH3P22223 RNA5SP421-201ENST00000516864 134 ntBASIC15.7■□□□□ 0.1
CDH3P22223 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDH3P22223 AL158211.3-201ENST00000607385 239 ntBASIC15.7■□□□□ 0.1
CDH3P22223 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH3P22223 AL390754.1-201ENST00000619088 582 ntBASIC15.7■□□□□ 0.1
CDH3P22223 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
CDH3P22223 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH3P22223 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDH3P22223 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH3P22223 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH3P22223 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDH3P22223 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH3P22223 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH3P22223 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.7■□□□□ 0.1
CDH3P22223 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH3P22223 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms