Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.12■□□□□ 0.17
VCLP18206 AL136317.3-201ENST00000618497 906 ntBASIC16.12■□□□□ 0.17
VCLP18206 AP001059.3-201ENST00000619053 235 ntBASIC16.12■□□□□ 0.17
VCLP18206 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VCLP18206 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.12■□□□□ 0.17
VCLP18206 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VCLP18206 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.12■□□□□ 0.17
VCLP18206 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.12■□□□□ 0.17
VCLP18206 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VCLP18206 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VCLP18206 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VCLP18206 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VCLP18206 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VCLP18206 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VCLP18206 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VCLP18206 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VCLP18206 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.11■□□□□ 0.17
VCLP18206 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
VCLP18206 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.11■□□□□ 0.17
VCLP18206 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.11■□□□□ 0.17
VCLP18206 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 AP002414.2-201ENST00000591780 3365 ntBASIC16.11■□□□□ 0.17
VCLP18206 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VCLP18206 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.11■□□□□ 0.17
VCLP18206 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 FAM58DP-201ENST00000428076 619 ntBASIC16.11■□□□□ 0.17
VCLP18206 AC093724.1-201ENST00000448659 1027 ntBASIC16.11■□□□□ 0.17
VCLP18206 AC067863.1-201ENST00000494933 530 ntBASIC16.11■□□□□ 0.17
VCLP18206 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.11■□□□□ 0.17
VCLP18206 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.11■□□□□ 0.17
VCLP18206 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.11■□□□□ 0.17
VCLP18206 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.11■□□□□ 0.17
VCLP18206 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.11■□□□□ 0.17
VCLP18206 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VCLP18206 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.11■□□□□ 0.17
VCLP18206 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.11■□□□□ 0.17
VCLP18206 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.11■□□□□ 0.17
VCLP18206 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 U82695.1-201ENST00000635752 1889 ntBASIC16.11■□□□□ 0.17
VCLP18206 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
VCLP18206 AC013268.4-201ENST00000637413 2228 ntBASIC16.11■□□□□ 0.17
VCLP18206 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VCLP18206 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
VCLP18206 AC005622.1-201ENST00000636801 1703 ntBASIC16.11■□□□□ 0.17
VCLP18206 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.1■□□□□ 0.17
VCLP18206 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
VCLP18206 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.1■□□□□ 0.17
VCLP18206 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VCLP18206 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
VCLP18206 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.1■□□□□ 0.17
VCLP18206 AL645939.2-201ENST00000427340 991 ntBASIC16.1■□□□□ 0.17
VCLP18206 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.1■□□□□ 0.17
VCLP18206 FAM86GP-201ENST00000448322 971 ntBASIC16.1■□□□□ 0.17
VCLP18206 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.1■□□□□ 0.17
VCLP18206 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.1■□□□□ 0.17
VCLP18206 AL512356.2-201ENST00000546955 174 ntBASIC16.1■□□□□ 0.17
VCLP18206 AC024267.1-201ENST00000582320 895 ntBASIC16.1■□□□□ 0.17
VCLP18206 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.1■□□□□ 0.17
VCLP18206 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.1■□□□□ 0.17
VCLP18206 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VCLP18206 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.1■□□□□ 0.17
VCLP18206 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.1■□□□□ 0.17
VCLP18206 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.1■□□□□ 0.17
VCLP18206 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.1■□□□□ 0.17
VCLP18206 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.1■□□□□ 0.17
VCLP18206 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VCLP18206 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VCLP18206 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
VCLP18206 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
VCLP18206 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VCLP18206 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VCLP18206 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VCLP18206 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VCLP18206 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VCLP18206 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VCLP18206 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VCLP18206 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms